
A non standard finite difference model for a class of renewal equations in epidemiology
Mathematical models based on non-linear integral and integro-differential equations are gaining
increasing attention in mathematical epidemiology due to their ability to incorporate the past
infection dynamic into its current development. This property is particularly suitable to represent
the evolution of diseases where the dependence of infectivity on the time since becoming
infected plays a crucial role.
Enhanced pClustering and its applications to gene expression data
Clustering has been one of the most popular methods to discover useful biological insights from DNA microarray. An interesting paradigm is simultaneous clustering of both genes and experiments. This "biclustering "paradigm aims at discovering clusters that consist of a subset of the genes showing a coherent expression pattern over a subset of conditions. The pClustering approach is a technique that belongs to this paradigm. Despite many theoretical advantages, this technique has been rarely applied to actual gene expression data analysis.
Discovering coherent biclusters from gene expression data using zero-suppressed binary decision diagrams
The biclustering method can be a very useful analysis tool when some genes have multiple functions and experimental conditions are diverse in gene expression measurement. This is because the biclustering approach, in contrast to the conventional clustering techniques, focuses on finding a subset of the genes and a subset of the experimental conditions that together exhibit coherent behavior. However, the biclustering problem is inherently intractable, and it is often computationally costly to find biclusters with high levels of coherence.
TOM: a web-based integrated approach for identification of candidate disease genes
The massive production of biological data by means of highly parallel devices like microarrays for gene expression has paved the way to new possible approaches in molecular genetics. Among them the possibility of inferring biological answers by querying large amounts of expression data. Based on this principle, we present here TOM, a web-based resource for the efficient extraction of candidate genes for hereditary diseases. The service requires the previous knowledge of at least another gene responsible for the disease and the linkage area, or else of two disease associated genetic intervals.
Circuits and systems for high-throughput biology
The importance of circuits and systems for high-throughput biological data acquisition in biomedical research are discussed. High-throughput biological data acquisition and processing technologies have shifted the focus of biological research from the the traditional experimental science to that of information science. Powerful computation and communication means can be applied to a very large amount of apparently incoherent data coming from biomedical research.





