Difficulties and solutions for estimating transport by perturbative experiments

The first part of this work reviews the algebraic matricial approach to transport data inversion. It works for the convection-diffusion transport equation used for periodic signals and provides a formally exact solution, as well as a quantitative assessment of error bars. The standard methods of reconstruction infer the diffusivity D and pinch V by matching experimental data against those simulated by transport codes. These methods do not warrant the validity of either the underlying models of transport, or of the reconstructed D(r) and V(r), even when the results look reasonable.

Computational biology modeling across different scales

One of the most formidable challenges in modern biology is to get a unified view of the various mechanisms governing the behavior and of the causal relationships among different parts of a living system. It is coming clearer nowadays that to get such comprehensive picture computational models embracing different observation levels in space and time have to be formulated to explain the enormous amount of data deriving from -omic high throughput measurements methods.

The turning circle maneuver of a Twin Screw Vessel with different stern appendages configuration

The turning circle maneuver of a self-propelled tanker like ship model is numerically simulated through the integration of the unsteady Reynolds averaged Navier-Stokes (uRaNS) equations coupled with the equations of the motion of a rigid body. The solution is achieved by means of the unsteady RANS solver Xnavis developed at CNR-INSEAN. The focus here is on the analysis of the maneuvering behavior of the ship with two different stern appendages configurations; namely, a twin screw with a single rudder and a twin screw, twin rudder with a central skeg.

Hydrodynamical Numerical Simulations of Complex-Shaped Moving Bodies by means of Dynamic Overlapping Grids

In this work the numerical simulations of a submarine in straight ahead motion with the appendages at several prescribed deflection angles are performed. Due to the complex geometry involved (the presence of moving appendages), these simulations are rather demanding form the point of view of both grid generation and accuracy of the numerical method. In order to analyze these aspects, the numerical solutions are computed by means of an unsteady Reynolds averaged Navier-Stokes equations solver, which is particularly effective because of the high order discretization schemes adopted.

Structural analysis of protein Z gene variants in patients with foetal losses

The role of protein Z (PZ) in the etiology of human disorders is unclear. A number of PZ gene variants, sporadic or polymorphic and found exclusively in the serine protease domain, have been observed. Crystal structures of PZ in complex with the PZ-dependent inhibitor (PZI) have been recently obtained. The aim of this study was a structural investigation of the serine protease PZ domain, aiming at finding common traits across disease-linked mutations. We performed 10-20 ns molecular dynamics for each of the observed PZ mutants to investigate their structure in aqueous solution.

Some interpolating operators of de la Vallée Poussin type

We consider discrete versions of the de la Vallée-Poussin algebraic operator. We give a simple sufficient condition in order that such discrete operators interpolate, and in particular we study the case of the Bernstein-Szego weights. Furthermore we obtain good error estimates in the cases of the sup-norm and L 1-norm, which are critical cases for the classical Lagrange interpolation.

Application of dynamic overlapping grids to the simulation of the flow around a fully-appended submarine

Abstract The hydrodynamic characterization of control appendages for ship hulls is of paramount importance for the assessment of maneuverability characteristics. However, the accurate numerical simulation of turbulent flow around a fully appended maneuvering vessel is a challenging task, because of the geometrical complexity of the appendages and of the complications connected to their movement during the computation. In addition, the accurate description of the flow within the boundary layer is important in order to estimate correctly the forces acting on each portion of the hull.