Efficient Algebraic Multigrid Preconditioners on Clusters of GPUs

Many scientific applications require the solution of large and sparse linear systems of equations using Krylov subspace methods; in this case, the choice of an effective preconditioner may be crucial for the convergence of the Krylov solver. Algebraic MultiGrid (AMG) methods are widely used as preconditioners, because of their optimal computational cost and their algorithmic scalability. The wide availability of GPUs, now found in many of the fastest supercomputers, poses the problem of implementing efficiently these methods on high-throughput processors.

Bootstrap AMG for Spectral Clustering

Graph Laplacian is a popular tool for analyzing graphs, in particular in graph partitioning and clustering. Given a notion of similarity (via an adjacency matrix), graph clustering refers to identifying different groups such that vertices in the same group are more similar compared to vertices across different groups. Data clustering can be reformulated in terms of a graph clustering problem when the given set of data is represented as a graph, also known as similarity graph.

Preliminary assessment of the quality of Methyl chloride (CH3Cl) from MIPAS on ENVISAT measurements

The Michelson Interferometer for Passive Atmospheric Sounding (MIPAS) is a limb-viewing infrared Fourier transform spectrometer that operated from 2002 to 2012 on board the ENVISAT satellite. The fruitful collaboration among spectroscopists, Level 1, Level 2, and validation teams in the frame of the MIPAS Quality Working Group has recently led to the implementation of significant changes in both ESA Level 1 and Level 2 processors, as well as in the spectroscopic database and in some absorption cross-sections.

Assessment of quality of MIPAS ESA L2 products

The Michelson Interferometer for Passive Atmospheric Sounding (MIPAS) is a limb-viewing infrared Fourier transform spectrometer that operated from 2002 to 2012 onboard the ENVISAT satellite. The analysis of MIPAS measurements allows to study the temporal evolution of numerous species of interest for the study of the ozone in the stratosphere, pollutants and many green-house gases. The objective of the MIPAS Quality Working Group is to improve the quality of the MIPAS products through a fruitful collaboration among spectroscopists, Level 1, Level 2, and validation teams.

Tethered Semiflexible Polymer under Large Amplitude Oscillatory Shear

The properties of a semiflexible polymer with fixed ends exposed to oscillatory shear flow are investigated by simulations. The two-dimensionally confined polymer is modeled as a linear bead-spring chain, and the interaction with the fluid is described by the Brownian multiparticle collision dynamics approach. For small shear rates, the tethering of the ends leads to a more-or-less linear oscillatory response. However, at high shear rates, we found a strongly nonlinear reaction, with a polymer (partially) wrapped around the fixation points. This leads to an overall shrinkage of the polymer.

Anchored semiflexible polymer under oscillatory shear flow

The properties of a semiflexible polymer with fixed ends under oscillatory shear flow are investigated by numerical simulations. The polymer is confined in two dimensions and is modeled as a worm-like chain. The interaction with the fluid is taken into account by the Brownian multiparticle collision dynamics approach. For small shear rates, a linear oscillatory response appears. However, at high shear rates, we find a strongly nonlinear behavior with the polymer wrapping around the fixation points and shrinking.

Mesoscopic simulations at the physics-chemistry-biology interface

This review discusses the lattice Boltzmann-particle dynamics (LBPD) multiscale paradigm for the simulation of complex states of flowing matter at the interface between physics, chemistry, and biology. In particular, current large-scale LBPD simulations of biopolymer translocation across cellular membranes, molecular transport in ion channels, and amyloid aggregation in cells are described.

Lattice Boltzmann methods and active fluids

We review the state of the art of active fluids with particular attention to hydrodynamic continuous models and to the use of Lattice Boltzmann Methods (LBM) in this field. We present the thermodynamics of active fluids, in terms of liquid crystals modelling adapted to describe large-scale organization of active systems, as well as other effective phenomenological models. We discuss how LBM can be implemented to solve the hydrodynamics of active matter, starting from the case of a simple fluid, for which we explicitly recover the continuous equations by means of Chapman-Enskog expansion.

Computer aided analysis of the buildings

This paper examines how information systems can assist experts to analyse the state of conservation of buildings of historic importance. The main focus is on image compression, characterisation and recognition, all of which are fundamental for defining a database on the state of conservation. In particular, an overview of available methods is presented for characterising the structure of materials and recognising the various degrees of degradation. A new unified approach to image compression, characterisation and recognition is also proposed.

Online monitoring data services for ecosystem indicators: an overview of ECOPOTENTIAL results

The huge volumes of Earth Observation (EO) data and their processing is overwhelming for many employees in Protected Areas (PAs) and hence not often undertaken. The need is to provide a tool that transforms EO data into easy to interpret and use products. The Virtual Laboratory, empowered by cloud-computing technologies, allows the execution of multiple workflows (modules) and models, tailor made for the needs of the Protected Areas, accessible and open for all. Latter minimizes the requirement for local installations to execute relevant applications.