On the impact of controlled wall roughness shape on the flow of a soft material
We explore the impact of geometrical corrugations on the near-wall flow properties of a soft material driven in a confined rough microchannel. By means of numerical simulations, we perform a quantitative analysis of the relation between the flow rate ? and the wall stress ?w for a number of setups, by changing both the roughness values as well as the roughness shape. Roughness suppresses the flow, with the existence of a characteristic value of ?w at which flow sets in. Just above the onset of flow, we quantitatively analyze the relation between ? and ?w.
Dynamic symmetry-breaking in mutually annihilating fluids with selective interfaces
The selective entrapment of mutually annihilating species within a phase-changing carrier fluid is explored by both analytical and numerical means. The model takes full account of the dynamic heterogeneity which arises as a result of the coupling between hydrodynamic transport, dynamic phase-transitions and chemical reactions between the participating species, in the presence of a selective droplet interface. Special attention is paid to the dynamic symmetry breaking between the mass of the two species entrapped within the expanding droplet as a function of time.
Exploiting multi-level parallelism for stitching very large microscopy images
Due to the limited field of view of the microscopes, acquisitions of macroscopic specimens require many parallel image stacks to cover the whole volume of interest. Overlapping regions are introduced among stacks in order to make it possible automatic alignment by means of a 3D stitching tool. Since state-of-the-art microscopes coupled with chemical clearing procedures can generate 3D images whose size exceeds the Terabyte, parallelization is required to keep stitching time within acceptable limits.
Measure-valued solutions to a nonlinear fourth-order regularization of forward-backward parabolic equations
We introduce and analyze a new, nonlinear fourth-order regularization of forwardbackward parabolic equations. In one space dimension, under general assumptions on the potentials, which include those of Perona-Malik type, we prove existence of Radon measure-valued solutions under both natural and essential boundary conditions.
The phenotypic variations of multi-locus imprinting disturbances associated with maternal-effect variants of NLRP5 range from overt imprinting disorder to apparently healthy phenotype
Background
A subset of individuals affected by imprinting disorders displays multi-locus imprinting disturbances (MLID). MLID has been associated with maternal-effect variants that alter the maintenance of methylation at germline-derived differentially methylated regions (gDMRs) in early embryogenesis. Pedigrees of individuals with MLID also include siblings with healthy phenotype.
Fixation probabilities in weakly compressible fluid flows
Competition between biological species in marine environments is affected by the motion of the surrounding fluid. An effective 2D compressibility can arise, for example, from the convergence and divergence of water masses at the depth at which passively traveling photosynthetic organisms are restricted to live. In this report, we seek to quantitatively study genetics under flow. To this end, we couple an off-lattice agent-based simulation of two populations in 1D to a weakly compressible velocity field--first a sine wave and then a shell model of turbulence.