ZFP57 recognizes multiple and closely spaced sequence motif variants to maintain repressive epigenetic marks in mouse embryonic stem cells.

Imprinting Control Regions (ICRs) need to maintain their parental allele-specific DNA methylation during early embryogenesis despite genome-wide demethylation and subsequent de novo methylation. ZFP57 and KAP1 are both required for maintaining the repressive DNA methylation and H3-lysine-9-trimethylation (H3K9me3) at ICRs. In vitro, ZFP57 binds a specific hexanucleotide motif that is enriched at its genomic binding sites.

An empirical study on optic disc segmentation using an active contour model

The accurate segmentation of the optic disc (OD) offers an important cue to extract other retinal features in an automated diagnostic system, which in turn will assist ophthalmologists to track many retinopathy conditions such as glaucoma. Research contributions regarding the OD segmentation is on the rise, since the design of a robust automated system would help prevent blindness, for instance, by diagnosing glaucoma at an early stage and a condition known as ocular hypertension.

A non-local rare mutations model for quasispecies and prisoner's dilemma: Numerical assessment of qualitative behaviour

An integro-differential model for evolutionary dynamics with mutations is investigated by improving the understanding of its behaviour using numerical simulations. The proposed numerical approach can handle also density dependent fitness, and gives new insights about the role of mutation in the preservation of cooperation.

On a continuous mixed strategies model for Evolutionary game theory

We consider an integro-differential model for evolutionary gametheory which describes the evolution of a population adopting mixed strategies.Using a reformulation based on the first moments of the solution, we provesome analytical properties of the model and global estimates. The asymptoticbehavior and the stability of solutions in the case of two strategies is analyzedin details. Numerical schemes for two and three strategies which are able tocapture the correct equilibrium states are also proposed together with severalnumerical examples. © American Institute of Mathematical Sciences.

Time asymptotic high order schemes for dissipative BGK hyperbolic systems

We introduce a new class of finite differences schemes to approximate one dimensional dissipative semilinear hyperbolic systems with a BGK structure. Using precise analytical time-decay estimates of the local truncation error, it is possible to design schemes, based on the standard upwind approximation, which are increasingly accurate for large times when approximating small perturbations of constant asymptotic states. Numerical tests show their better performances with respect to those of other schemes.

Rare mutations in evolutionary dynamics

In this paper we study the effect of rare mutations, driven by a marked point process, on the evolutionary behavior of a population. We derive a Kolmogorov equation describing the expected values of the different frequencies and prove some rigorous analytical results about their behavior. Finally, in a simple case of two different quasispecies, we are able to prove that the rarity of mutations increases the survival opportunity of the low fitness species.

New Results on Rational Approximation

First asymptotic relations of Voronovskaya-type for rational operators of Shepard-type are shown. A positive answer in some senses to a problem on the pointwise approximation power of linear operators on equidistant nodes posed by Gavrea, Gonska and Kacs is given. Direct and converse results, computational aspects and Gruss-type inequalities are also proved. Finally an application to images compression is discussed, showing the outperformance of such operators in some senses.

A Numerical Comparison Between Degenerate Parabolic and Quasilinear Hyperbolic Models of Cell Movements Under Chemotaxis

We consider two models which were both designed to describe the movement of eukaryotic cells responding to chemical signals. Besides a common standard parabolic equation for the diffusion of a chemoattractant, like chemokines or growth factors, the two models differ for the equations describing the movement of cells. The first model is based on a quasilinear hyperbolic system with damping, the other one on a degenerate parabolic equation. The two models have the same stationary solutions, which may contain some regions with vacuum.