Lattice Boltzmann approach for complex nonequilibrium flows (vol 92, 043308, 2015)

We present a lattice Boltzmann realization of Grad's extended hydrodynamic approach to nonequilibrium flows. This is achieved by using higher-order isotropic lattices coupled with a higher-order regularization procedure. The method is assessed for flow across parallel plates and three-dimensional flows in porous media, showing excellent agreement of the mass flow with analytical and numerical solutions of the Boltzmann equation across the full range of Knudsen numbers, from the hydrodynamic regime to ballistic motion.

A Derivative-Free Riemannian Powell's Method, Minimizing Hartley-Entropy-Based ICA Contrast

Even though the Hartley-entropy-based contrast function guarantees an unmixing local minimum, the reported nonsmooth optimization techniques that minimize this nondifferentiable function encounter computational bottlenecks. Toward this, Powell's derivative-free optimization method has been extended to a Riemannian manifold, namely, oblique manifold, for the recovery of quasi-correlated sources by minimizing this contrast function.

Numerical simulation of conformational variability in biopolymer translocation through wide nanopores

Numerical results on the translocation of long biopolymers through mid-sized and wide pores are presented. The simulations are based on a novel methodology which couples molecular motion to a mesoscopic fluid solvent. Thousands of events of long polymers (up to 8000 monomers) are monitored as they pass through nanopores. Comparison between the different pore sizes shows that wide pores can host a larger number of multiple biopolymer segments, as compared to smaller pores.

Bridging InSAR and GPS Tomography: A New Differential Geometrical Constraint

The integration of interferometric synthetic aperture radar (InSAR) and GPS tomography techniques for the estimation of the 3-D distribution of atmosphere refractivity is discussed. A methodology to use the maps of the temporal changes of precipitable water vapor (PWV) provided by InSAR as a further constraint in the GPS tomography is described. The aim of the methodology is to increase the accuracy of the GPS tomography reconstruction of the atmosphere's refractivity. The results, which are obtained with SAR and GPS data acquired over the Lisbon area, Portugal, are presented and assessed.

Integration of InSAR Analysis and Numerical

In this work, we exploit the integration of an advanced synthetic aperture radar (SAR) interferometry technique and the application of the finite-element method for the assessment and the interpretation of a localized subsidence phenomenon that took place within a specific area of Lisbon, Portugal. SAR images over the Lisbon city, covering different time intervals in the period of 1995-2010, were acquired and processed by means of the persistent scatterers (PSs) technique.

An improvement of dimension-free Sobolev imbeddings in r.i. spaces

We prove a dimension-invariant imbedding estimate for Sobolev spaces of first order into a small Lebesgue space, and we establish the optimality of its fundamental function. Namely, for any 1 < p < ?, the inequality with a constant c_p, related to the imbedding of W_0^{1,p}(B_n) into Y_p(0,1), where Yp(0,1) is a rearrangement-invariant Banach function space independent of the dimension n, B_n is the ball in R^n of measure 1 and c_p is a constant independent of n, is satisfied by the small Lebesgue space L(p,p? /2 (0, 1).

A hydro-kinetic scheme for the dynamics of hydrogen bonds in water-like fluids

A hydro-kinetic scheme for water-like fluids, based on a lattice version of the Boltzmann equation, is presented and applied to the popular TIP3P model of liquid water. By proceeding in much larger steps than molecular dynamics, the scheme proves to be very effective in attaining global minima of classical pair potentials with directional and radial interactions, as confirmed by further simulations using the three-dimensional Ben-Naim water potential.

A critical assessment of methods to recover information from averaged data

Conformational heterogeneity is key to the function of many biomacromolecules, but only a few groups have tried to characterize it until recently. Now, thanks to the increased throughput of experimental data and the increased computational power, the problem of the characterization of protein structural variability has become more and more popular. Several groups have devoted their efforts in trying to create quantitative, reliable and accurate protocols for extracting such information from averaged data. We analyze here different approaches, discussing strengths and weaknesses of each.

A MATHEMATICAL MODEL FOR THE ENHANCED CYTOPLASMIC TRANSPORT How to Get (Faster) to the Nucleus

We consider a simple model for signal transport in the cytoplasm. Following some recent experimental evidences, the standard diffusion model is supplemented by advection operated through an attachement/detachement mechanism along microtubules. This model is given by a system of partial differential equations which are cast in different dimensions and connected by suitable exchange rules. A numerical scheme is introduced and some simulations are presented and discussed to show the performances of our model.