Source modelling of ElectroCorticoGraphy data: stability analysis and spatial filtering

ElectroCOrticoGraphy (ECoG) is an invasive neuroimaging technique that measures electrical potentials produced by brain currents via an electrode grid implanted on the cortical surface. A full interpretation of ECoG data is difficult because it requires solving the inverse problem of reconstructing the spatio-temporal distribution of neural currents responsible of the recorded ECoG signals, which is ill-posed. Only in the last few years novel computational methods to solve this inverse problem have been developed. This study describes a beamformer method for ECoG source modeling.

The hierarchical organization of natural protein interaction networks confers self-organization properties on pseudocells.

Background Cell organization is governed and maintained via specific interactions among its constituent macromolecules. Comparison of the experimentally determined protein interaction networks in different model organisms has revealed little conservation of the specific edges linking ortholog proteins. Nevertheless, some topological characteristics of the graphs representing the networks - namely non-random degree distribution and high clustering coefficient - are shared by networks of distantly related organisms.

Colloquium: Large scale simulations on GPU clusters

Graphics processing units (GPU) are currently used as a cost-effective platform forcomputer simulations and big-data processing. Large scale applications require thatmultiple GPUs work together but the efficiency obtained with cluster of GPUs is, at times,sub-optimal because the GPU features are not exploited at their best. We describe how itis possible to achieve an excellent efficiency for applications in statistical mechanics,particle dynamics and networks analysis by using suitable memory access patterns andmechanisms like CUDA streams, profiling tools, etc.

Clustering of vertically constrained passive particles in homogeneous isotropic turbulence

We analyze the dynamics of small particles vertically confined, by means of a linear restoring force, to move within a horizontal fluid slab in a three-dimensional (3D) homogeneous isotropic turbulent velocity field. The model that we introduce and study is possibly the simplest description for the dynamics of small aquatic organisms that, due to swimming, active regulation of their buoyancy, or any other mechanism, maintain themselves in a shallow horizontal layer below the free surface of oceans or lakes.

On a pseudoparabolic regularization of a forward-backward-forward equation

We consider an initial-boundary value problem for a degenerate pseudoparabolic regularization of a nonlinear forward-backward-forward parabolic equation, with a bounded nonlinearity which is increasing at infinity. We prove existence of suitably defined nonnegative solutions of the problem in a space of Radon measures. Solutions satisfy several monotonicity and regularization properties; in particular, their singular part is nonincreasing and may disappear in finite time.

FLOW LAMINARIZATION AND ACCELERATION BY SUSPENDED PARTICLES

In [Comm. Appl. Math. Comput. Sci., 4 (2009), pp. 153-175], Barenblatt presents a model for partial laminarization and acceleration of shear flows by the presence of suspended particles of different sizes, and provides a formal asymptotic analysis of the resulting velocity equation. In the present paper we revisit the model. In particular we allow for a continuum of particle sizes, rewrite the velocity equation in a form which involves the Laplace transform of a given function or measure, and provide several rigorous asymptotic expansions for the velocity.

Law of the wall in an unstably stratified turbulent channel flow

We perform direct numerical simulations of an unstably stratified turbulent channel flow to address the effects of buoyancy on the boundary layer dynamics and mean field quantities. We systematically span a range of parameters in the space of friction Reynolds number (Re<inf>?</inf>)and Rayleigh number (Ra). Our focus is on deviations from the logarithmic law of the wall due to buoyant motion. The effects of convection in the relevant ranges are discussed, providing measurements of mean profiles of velocity, temperature and Reynolds stresses as well as of the friction coefficient.

Bayesian estimation of multiple static dipoles from EEG time series: validation of an SMC sampler

Source modeling of EEG data is an important tool for both neuroscience and clinical applications, such as epilepsy. Despite their simplicity, multiple dipole models remain highly desirable to explain neural sources. However, estimating dipole models from EEG time-series remains a difficult task, mainly due to the ill-posedness of the inverse problem and to the fact that the number of dipoles is usually not known a priori.

Thin plate approximation in active infrared thermography

In this work, we find and test a new approximated formula (based on the thin plate approximation), for recovering small, unknown damages on the inaccessible surface of a thin conducting (aluminium) plate. We solve this inverse problem from a controlled heat flux and a sequence of temperature maps on the accessible front boundary of our sample. We heat the front boundary by means of a sinusoidal flux. In the meanwhile, we take a sequence of temperature maps of the same side by means of an infrared camera. This procedure is called active infrared thermography.