Chromatin and transcriptional response to loss of TBX1 in differentiating mouse P19Cl6 and embryonic stem cells

The T-box transcription factor TBX1 has critical roles in the cardiopharyngeal lineage and the gene is haploinsufficient in DiGeorge syndrome, a typical developmental anomaly of the pharyngeal apparatus. Despite almost two decades of research, if and how TBX1 function triggers chromatin remodeling is not known. Here, we explored genome-wide gene expression and chromatin remodeling in two independent cellular models of Tbx1 loss of function, mouse embryonic carcinoma cells P19Cl6, and mouse embryonic stem cells (mESCs).

Patient, interrupted: MEG oscillation dynamics reveal temporal dysconnectivity in schizophrenia

Current theories of schizophrenia emphasize the role of altered information integration as the core dysfunction of this illness. While ample neuroimaging evidence for such accounts comes from investigations of spatial connectivity, understanding temporal disruptions is important to fully capture the essence of dysconnectivity in schizophrenia.

Evaluating visibility at sea: Instrumental data and historical nautical records. Mount Etna from the Calabrian Ionian coast (Italy)

Visibility has an encompassing importance in humans' perception of the landscape, since the first encounter with a new environment normally occurs through sight. In historical and archaeological studies, two main methods (i.e., the geometric method and the Geographical Information System [GIS] computation) have been employed to determine the distance from which an object can be recognized. However, neither is exhaustive when applied to a maritime context, where the main factor affecting the visibility radius is weather.

Soft congestion approximation to the one-dimensional constrained Euler equations

This article is concerned with the analysis of the one-dimensional compressible Euler equations with a singular pressure law, the so-called hard sphere equation of state. The result is twofold. First, we establish the existence of bounded weak solutions by means of a viscous regularization and refined compensated compactness arguments. Second, we investigate the smooth setting by providing a de- tailed description of the impact of the singular pressure on the breakdown of the solutions.

Filtered interpolation for solving Prandtl's integro-differential equations

In order to solve Prandtl--type equations we propose a collocation--quadrature method based on de la Vallée Poussin (briefly VP) filtered interpolation at Chebyshev nodes. Uniform convergence and stability are proved in a couple of Holder--Zygmund spaces of locally continuous functions. With respect to classical methods based on Lagrange interpolation at the same collocation nodes, we succeed in reproducing the optimal convergence rates of the L2 case and cut off the typical log factor which seemed inevitable dealing with uniform norms.

AMG preconditioners for Linear Solvers towards Extreme Scale

Linear solvers for large and sparse systems are a key element of scientific applications, and their efficient implementation is necessary to harness the computational power of current computers. Algebraic Multigrid (AMG) Preconditioners are a popular ingredient of such linear solvers; this is the motivation for the present work where we examine some recent developments in a package of AMG preconditioners to improve efficiency, scalability, and robustness on extreme-scale problems.

Computing functions of very large matrices with small TT/QTT ranks by quadrature formulas

The computation of matrix functions using quadrature formulas and rational approximations of very large structured matrices using tensor trains (TT), and quantized tensor trains (QTT) is considered here. The focus is on matrices with a small TT/QTT rank. Some analysis of the error produced by the use of the TT/QTT representation and the underlying approximation formula used is also provided.