Designing a Network Proximity-Based Drug Repurposing Strategy for COVID-19

The ongoing COVID-19 pandemic still requires fast and effective efforts from all fronts, including epidemiology, clinical practice, molecular medicine, and pharmacology. A comprehensive molecular framework of the disease is needed to better understand its pathological mechanisms, and to design successful treatments able to slow down and stop the impressive pace of the outbreak and harsh clinical symptomatology, possibly via the use of readily available, off-the-shelf drugs.

Lattice Boltzmann simulations capture the multiscale physics of soft flowing crystals

The study of the underlying physics of soft flowing materials depends heavily on numerical simulations, due to the complex structure of the governing equations reflecting the competition of concurrent mechanisms acting at widely disparate scales in space and time. A full-scale computational modelling remains a formidable challenge since it amounts to simultaneously handling six or more spatial decades in space and twice as many in time.

Bounds in Total Variation Distance for Discrete-time Processes on the Sequence Space

Let P and (P) over tilde be the laws of two discrete-time stochastic processes defined on the sequence space S-N,where S is a finite set of points. In this paper we derive a bound on the total variation distance d(TV)(P, (P) over tilde) in terms of the cylindrical projections of P and (P) over tilde. We apply the result to Markov chains with finite state space and random walks on Z with not necessarily independent increments, and we consider several examples.

The epigenetics of inflammaging: The contribution of age-related heterochromatin loss and locus-specific remodelling and the modulation by environmental stimuli

A growing amount of evidences indicates that inflammaging - the chronic, low grade inflammation state characteristic of the elderly - is the result of genetic as well as environmental or stochastic factors. Some of these, such as the accumulation of senescent cells that are persistent during aging or accompany its progression, seem to be sufficient to initiate the aging process and to fuel it. Others, like exposure to environmental compounds or infections, are temporary and resolve within a (relatively) short time.

Analysis of a model for waterborne diseases with Allee effect on bacteria

A limitation of current modeling studies in waterborne diseases (one of the leading causes of death worldwide) is that the intrinsic dynamics of the pathogens is poorly addressed, leading to incomplete, and often, inadequate understanding of the pathogen evolution and its impact on disease transmission and spread. To overcome these limitations, in this paper, we consider an ODEs model with bacterial growth inducing Allee effect. We adopt an adequate functional response to significantly express the shape of indirect transmission.

Soft channel formation and symmetry breaking in exotic active emulsions

We use computer simulations to study the morphology and rheological properties of a bidimensional emulsion resulting from a mixture of a passive isotropic fluid and an active contractile polar gel, in the presence of a surfactant that favours the emulsification of the two phases. By varying the intensity of the contractile activity and of an externally imposed shear flow, we find three possible morphologies. For low shear rates, a simple lamellar state is obtained.

Shear dynamics of confined bijels

Bicontinuous interfacially jammed emulsion gels ("bijels") represent a new class of soft materials made of a densely packed monolayer of solid particles sequestered at the interface of a bicontinuous fluid. Their mechanical properties are relevant to many applications, such as catalysis, energy conversion, soft robotics, and scaffolds for tissue engineering. While their stationary bulk properties have been covered in depth, much less is known about their behavior in the presence of an external shear.