The behavior of semiflexible polymers under external fields is numerically studied.

We generalize the nonstandard Euler and Heun schemes in order to provide explicit geometric numerical integrators for biochemical systems, here denoted as GeCo schemes, that preserve both positivity of the solutions and linear invariants. We relax the request on the order convergence of the denominator function for the first-order approximation and we let it depend on the step size also throughout the solution approximating values. The first-order variant is exact on a two-dimensional linear test problem.

Network-based epidemic models that account for heterogeneous contact patterns are extensively used to predict and control the diffusion of infectious diseases. We use census and survey data to reconstruct a geo-referenced and age-stratified synthetic urban population connected by stable social relations. We consider two kinds of interactions, distinguishing daily (household) contacts from other frequent contacts. Moreover, we allow any couple of individuals to have rare fortuitous interactions.

In this study we investigated the transcriptome and epigenome dynamics of the tomato fruit during post-harvest in a landrace belonging to a group of tomatoes (Solanum lycopersicum L.) collectively known as "Piennolo del Vesuvio", all characterized by a long shelflife. Expression of protein-coding genes and microRNAs as well as DNA methylation patterns and histone modifications were analysed in distinct post-harvest phases. Multi-omics data integration contributed to the elucidation of the molecular mechanisms underlying processes leading to long shelf-life.

We consider a nonminimally coupled curvature-matter gravity theory at the Solar System scale. Both a fifth force of Yukawa type and a further non-Newtonian extra force that arises from the nonminimal coupling are present in the solar interior and in the solar atmosphere up to interplanetary space. The extra force depends on the spatial gradient of space-time curvature R. The conditions under which the effects of such forces can be screened by the chameleon mechanism and be made consistent with Cassini measurement of parametrized post-Newtonian parameter gamma are examined.

This article studies M-type estimators for fitting robust additive models in the presence of anomalous data. The components in the additive model are allowed to have different degrees of smoothness. We introduce a new class of wavelet-based robust M-type estimators for performing simultaneous additive component estimation and variable selection in such inhomogeneous additive models. Each additive component is approximated by a truncated series expansion of wavelet bases, making it feasible to apply the method to nonequispaced data and sample sizes that are not necessarily a power of 2.

This study aimed at updating previous data on HIV-1 integrase variability, by using effective bioinformatics methods combining different statistical instruments from simple entropy and mutation rate to more specific approaches such as Hellinger distance. A total of 2133 HIV-1 integrase sequences were analyzed in: i) 1460 samples from drug-naïve [DN] individuals; ii) 386 samples from drug-experienced but INI-naïve [IN] individuals; iii) 287 samples from INI-experienced [IE] individuals.

In this paper, we study a dynamically consistent numerical method for the approximation of a nonlinear integro-differential equation modeling an epidemic with age of infection. The discrete scheme is based on direct quadrature methods with Gregory convolution weights and preserves, with no restrictive conditions on the step-length of integration h, some of the essential properties of the continuous system. In particular, the numerical solution is positive and bounded and, in cases of interest in applications, it is monotone.

FORUM (Far-infrared Outgoing Radiation Understanding and Monitoring) will fly as the ninth ESA's Earth Explorer mission, and an end-to-end simulator (E2ES) has been developed as a support tool for the mission selection process and the subsequent development phases. The current status of the FORUM E2ES project is presented together with the characterization of the capabilities of a full physics retrieval code applied to FORUM data.