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Background: The main goal of the whole transcriptome analysis is to correctly identify all expressed transcripts within a specific cell/tissue- at a particular stage and condition - to determine their structures and to measure their abundances. RNA-seq data promise to allow identification and… |
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Within the theoretical framework of the numerical stability analysis for the Volterra integral equations, we consider a new class of test problems and we study the long-time behavior of the numerical solution obtained by direct quadrature methods as a function of the stepsize. Furthermore, we… |
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In the near future, Exascale systems will need to bridge three technology gaps to achieve high performance while remaining under tight power constraints: energy efficiency and thermal control; extreme computation efficiency via HW acceleration and new arithmetic; methods and tools for seamless… |
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A scalar field equivalent to a nonideal "dark energy fluid" obeying a Shan-Chen-like equation of state is used as the background source of a flat Friedmann-Robertson-Walker cosmological spacetime to describe the inflationary epoch of our Universe. Within the slow-roll approximation, a number of… |
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We report a coarse-grained molecular dynamics simulation study of a bundle of parallel actin filaments under supercritical conditions pressing against a loaded mobile wall using a particle-based approach where each particle represents an actin unit. The filaments are grafted to a fixed wall at one… |
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In this perspective we take stock of the current state of the art of computational models for droplets microfluidics and we suggest some strategies which may open the way to the full-scale simulation of microfluidic phenomena with interfaces, from near-contact interactions to the device operational… |
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The main purpose of this paper is to develop a novel thermal lattice Boltzmann method (LBM) based on finite volume (FV) formulation. Validation of the suggested formulation is performed by simulating plane Poiseuille, backward-facing step and flow over circular cylinder. For this purpose, a cell-… |
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The RapidCell (RC) model was originally developed to simulate flagellar bacterial chemotaxis in environments with spatiotemporally varying chemoattractant gradients. RC is best suited for motility simulations in unbounded nonfluid environments; this limits its use in biomedical applications hinging… |
